- a -

• align_centers() : transforms.hpp
• ALL() : logger_level.hpp

- b -

• BASE_BTK_EXCEPTION_TYPE() : exceptions.hpp

- c -

• center() : transforms.hpp
• cosine_vector_angle() : vector_math.hpp
• create_rotation_matrix() : rotation.hpp
• cross() : vector_math.hpp
• cube() : common_functions.hpp

- d -

• default_assert_handler() : assertions.cpp , assertions.hpp
• deg2rad() : common_functions.hpp
• determinant() : rmsd.hpp
• DOUBLE_EPSILON() : constants.hpp

- e -

• equivalent() : common_functions.hpp
• error_msg() : logging.hpp

- f -

• fast_solve_3D_eigenvalues() : rmsd.cpp
• fast_solve_3D_eigenvectors() : rmsd.cpp
• FLOAT_EPSILON() : constants.hpp

- g -

• geometric_center() : properties.hpp
• get_element() : btk_container.hpp
• get_rmsd() : rmsd.hpp
• get_trivial_rmsd() : rmsd.hpp

- i -

• initialize_rotation_matrix() : rotation.cpp
• is_monomer_iterable() : system_base.hpp

- l -

• leastsquares_superposition() : rmsd.hpp
• length() : vector_math.hpp
• log_msg() : logging.hpp

- m -

• make_assert_message() : assertions.cpp , assertions.hpp

- n -

• normalize() : vector_math.hpp

- o -

• operator<<() : atom.hpp , system.hpp , polymer_structure.hpp , atomic_structure.hpp , pdb_atom_decorator.hpp

- p -

• point_angle() : linear_algebra.hpp
• point_dihedral() : linear_algebra.cpp
• project() : vector_math.cpp
• project_normal() : vector_math.cpp

- r -

• rad2deg() : common_functions.hpp
• rotate() : transforms.hpp

- s -

• select() : selections.hpp
• select_if() : selections.hpp
• set_vector_from_dihedral() : linear_algebra.cpp
• set_vector_from_two_angles() : linear_algebra.cpp
• setup_rmsd() : rmsd.hpp
• square() : common_functions.hpp

- t -

• transform() : transforms.hpp
• translate() : transforms.hpp

- v -

• vector_angle() : vector_math.hpp
• vector_dihedral() : vector_math.cpp

- w -

• within_sqr_dist() : linear_algebra.cpp

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