_storage | BTKContainer | [protected] |
atom_id_type typedef | Monomer | |
atom_iterator typedef | Monomer | |
atom_type typedef | Monomer | |
AtomicStructure(self_type const &source) | AtomicStructure | |
AtomicStructure(size_type n=0, const_reference t=value_type(), id_type type=id_type()) | AtomicStructure | [protected] |
AtomicStructure(AtomIterator i, AtomIterator j, id_type type=id_type()) | AtomicStructure | [protected] |
begin() | BTKContainer | [protected] |
begin() const | BTKContainer | [protected] |
BTKContainer(self_type const &source) | BTKContainer | [protected] |
BTKContainer(size_type n=0, const_reference t=value_type()) | BTKContainer | [protected] |
BTKContainer(InputIterator i, InputIterator j) | BTKContainer | [protected] |
BTKSequence(self_type const &source) | BTKSequence< AtomType, StorageStrategy > | [protected] |
BTKSequence(size_type n=0, const_reference t=value_type()) | BTKSequence< AtomType, StorageStrategy > | [protected] |
BTKSequence(InputIterator i, InputIterator j) | BTKSequence< AtomType, StorageStrategy > | [protected] |
chemical_type_system typedef | Monomer | |
ChemicallyTypedObject(chemical_type_system const &ts=chemical_type_system(), id_type t=id_type()) | ChemicallyTypedObject | |
ChemicallyTypedObject(self_type const &src) | ChemicallyTypedObject | |
clear() | BTKSequence< AtomType, StorageStrategy > | [protected, virtual] |
const_atom_iterator typedef | Monomer | |
const_iterator typedef | Monomer | |
const_pointer typedef | Monomer | |
const_reference typedef | Monomer | |
const_reverse_atom_iterator typedef | Monomer | |
const_reverse_iterator typedef | Monomer | |
dictionary typedef | Monomer | |
difference_type typedef | Monomer | |
empty() const | BTKContainer | [protected] |
end() | BTKContainer | [protected] |
end() const | BTKContainer | [protected] |
erase(iterator p) | BTKSequence< AtomType, StorageStrategy > | [protected, virtual] |
erase(iterator p, iterator q) | BTKSequence< AtomType, StorageStrategy > | [protected, virtual] |
front() | BTKSequence< AtomType, StorageStrategy > | [protected] |
front() const | BTKSequence< AtomType, StorageStrategy > | [protected] |
get_chemical_type_system() const | ChemicallyTypedObject | |
get_chemical_type_system() | ChemicallyTypedObject | |
get_dictionary() const | Monomer | [virtual] |
get_dictionary() | Monomer | [virtual] |
id_type typedef | Monomer | |
insert(iterator p, const_reference t) | BTKSequence< AtomType, StorageStrategy > | [protected, virtual] |
insert(iterator p, size_type n, const_reference t) | BTKSequence< AtomType, StorageStrategy > | [protected, virtual] |
insert(iterator p, InputIterator i, InputIterator j) | BTKSequence< AtomType, StorageStrategy > | [protected] |
iterator typedef | Monomer | |
max_size() const | BTKContainer | [protected] |
Monomer(unsigned n=0, atom_type const &a=atom_type(), id_type type=id_type(), int number=0) | Monomer | |
Monomer(AtomIterator i, AtomIterator j, monomer_id_type type, int number) | Monomer | |
Monomer(self_type const &source) | Monomer | |
monomer_begin() | Monomer | |
monomer_begin() const | Monomer | |
monomer_end() | Monomer | |
monomer_end() const | Monomer | |
monomer_id_type typedef | Monomer | |
monomer_rbegin() | Monomer | |
monomer_rbegin() const | Monomer | |
monomer_rend() | Monomer | |
monomer_rend() const | Monomer | |
name() const | ChemicallyTypedObject | |
num_atoms() const | AtomicStructure | |
number() const | Monomer | |
operator!=(self_type const &rhs) const | Monomer | |
BTK::UTILITY::ChemicallyTypedObject::operator!=(self_type const &rhs) const | ChemicallyTypedObject | [protected] |
BTK::UTILITY::BTKSequence< AtomType, StorageStrategy >::operator!=(self_type const &rhs) const | BTKContainer | [protected] |
operator<(self_type const &rhs) const | Monomer | |
BTK::UTILITY::ChemicallyTypedObject::operator<(self_type const &rhs) const | ChemicallyTypedObject | [protected] |
BTK::UTILITY::BTKSequence< AtomType, StorageStrategy >::operator<(self_type const &rhs) const | BTKContainer | [protected] |
operator=(self_type const &rhs) | Monomer | |
BTK::UTILITY::ChemicallyTypedObject::operator=(self_type const &src) | ChemicallyTypedObject | [protected] |
BTK::UTILITY::BTKSequence< AtomType, StorageStrategy >::operator=(self_type const &rhs) | BTKContainer | [protected] |
operator==(self_type const &rhs) const | Monomer | |
BTK::UTILITY::ChemicallyTypedObject::operator==(self_type const &rhs) const | ChemicallyTypedObject | [protected] |
BTK::UTILITY::BTKSequence< AtomType, StorageStrategy >::operator==(self_type const &rhs) const | BTKContainer | [protected] |
operator[](size_type n) | BTKContainer | [protected] |
operator[](size_type n) const | BTKContainer | [protected] |
pointer typedef | Monomer | |
print(std::ostream &os, size_type first_atom_num=1, size_type group_num=1, char chain_id= ' ') const | AtomicStructure | [virtual] |
rbegin() | BTKContainer | [protected] |
rbegin() const | BTKContainer | [protected] |
reference typedef | Monomer | |
rend() | BTKContainer | [protected] |
rend() const | BTKContainer | [protected] |
resize(size_type n, const_reference t=value_type()) | BTKSequence< AtomType, StorageStrategy > | [protected, virtual] |
reverse_atom_iterator typedef | Monomer | |
reverse_iterator typedef | Monomer | |
select(bool s=true) const | Monomer | |
selected() const | Monomer | |
set_chemical_type_system(chemical_type_system const &cts) | AtomicStructure | [virtual] |
BTK::UTILITY::ChemicallyTypedObject::set_chemical_type_system(chemical_type_system const &ts) | ChemicallyTypedObject | [protected, virtual] |
set_number(int number) | Monomer | |
set_type(id_type t) | ChemicallyTypedObject | [protected, virtual] |
size() const | BTKContainer | [protected] |
size_type typedef | Monomer | |
structure_begin() | AtomicStructure | |
structure_begin() const | AtomicStructure | |
structure_end() | AtomicStructure | |
structure_end() const | AtomicStructure | |
structure_id_type typedef | Monomer | |
structure_rbegin() | AtomicStructure | |
structure_rbegin() const | AtomicStructure | |
structure_rend() | AtomicStructure | |
structure_rend() const | AtomicStructure | |
swap(self_type &b) | Monomer | |
BTK::UTILITY::ChemicallyTypedObject::swap(self_type &rhs) | ChemicallyTypedObject | [protected] |
BTK::UTILITY::BTKSequence< AtomType, StorageStrategy >::swap(self_type &b) | BTKContainer | [protected] |
type() const | ChemicallyTypedObject | |
value_type typedef | Monomer | |
~AtomicStructure() | AtomicStructure | [virtual] |
~BTKContainer() | BTKContainer | [protected, virtual] |
~BTKSequence() | BTKSequence< AtomType, StorageStrategy > | [protected, virtual] |
~ChemicallyTypedObject() | ChemicallyTypedObject | [virtual] |
~Monomer() | Monomer | [virtual] |