| atom_dictionary typedef | PDBFileParser | |
| atom_id_type typedef | PDBFileParser | |
| close() | PDBFileParser | |
| dictionary() | PDBFileParser | |
| dictionary() const | PDBFileParser | |
| eat_whitespace(std::string const &s) const | PDBFileParser | [protected] |
| element_dictionary typedef | PDBFileParser | |
| element_id_type typedef | PDBFileParser | |
| find_model(int which) | PDBFileParser | [protected] |
| find_next_atom(bool find_hetatoms) | PDBFileParser | [protected] |
| get_current_model(PolymerSystemType &model_out, bool load_hetatoms=true) | PDBFileParser | |
| get_filename() const | PDBFileParser | |
| get_header() const | PDBFileParser | |
| get_model(int which, PolymerSystemType &model_out, bool load_hetatoms=true) | PDBFileParser | |
| get_next_model(PolymerSystemType &model_out, bool load_hetatoms=true) | PDBFileParser | |
| monomer_dictionary typedef | PDBFileParser | |
| monomer_id_type typedef | PDBFileParser | |
| open(std::string filename, int which_model=0) | PDBFileParser | |
| open_file() | PDBFileParser | [protected] |
| parse_atom(std::string const &atom_record, bool is_hetatom=false) | PDBFileParser | [protected] |
| parse_current_model(PolymerSystemType &model_out, bool load_hetatoms) | PDBFileParser | [protected] |
| PDBFileParser(type_system const &ts=type_system(), bool use_dynamic_types=true) | PDBFileParser | |
| PDBFileParser(std::string const &filename, int which_model=0, type_system const &ts=type_system(), bool use_dynamic_types=true) | PDBFileParser | |
| PDBFileParser(PDBFileParser const &src) | PDBFileParser | |
| rewind_file() | PDBFileParser | [protected] |
| save_header() | PDBFileParser | [protected] |
| save_hetatoms(AtomIterator het_begin, AtomIterator het_end, PolymerSystemType &model_out) | PDBFileParser | [protected] |
| type_system typedef | PDBFileParser | |
| ~PDBFileParser() | PDBFileParser | [virtual] |
