BTK: Compound Member Index

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a | b | c | d | e | f | g | i | l | m | n | o | p | r | s | t | w | ~

- a -

add_adjacent() : BTK::BuildableAtomDecorator< AtomBase >
add_monomer() : BTK::Polymer< MonomerType >
adjacent_begin() : BTK::BuildableAtomDecorator< AtomBase >
adjacent_end() : BTK::BuildableAtomDecorator< AtomBase >
advance() : BTK::PointerListStrategy< Predicate, Iterator >, BTK::MatchListStrategy< Predicate, Iterator >
alt_loc() : BTK::PDBAtomDecorator< AtomBase >
ang234() : BTK::AtomIndexTetrad
atom() : BTK::Polymer< MonomerType >, BTK::BuildableMonomer< AtomType >, BTK::AtomContainer< AtomType >
Atom() : BTK::Atom
atom_back() : BTK::Polymer< MonomerType >, BTK::AtomContainer< AtomType >
atom_begin() : BTK::Polymer< MonomerType >, BTK::AtomContainer< AtomType >
atom_end() : BTK::Polymer< MonomerType >, BTK::AtomContainer< AtomType >
atom_front() : BTK::Polymer< MonomerType >, BTK::AtomContainer< AtomType >
atom_index() : BTK::Atom
atom_index1() : BTK::AtomIndexTetrad, BTK::AtomIndexPair
atom_index2() : BTK::AtomIndexTetrad, BTK::AtomIndexPair
atom_index3() : BTK::AtomIndexTetrad
atom_name() : BTK::PDBAtomDecorator< AtomBase >, BTK::Atom
atom_num() : BTK::PDBAtomDecorator< AtomBase >
atom_rotator() : BTK::atom_rotator< AtomType >
atom_size() : BTK::Polymer< MonomerType >, BTK::AtomContainer< AtomType >
AtomContainer() : BTK::AtomContainer< AtomType >
AtomIndexPair() : BTK::AtomIndexPair
AtomIndexTetrad() : BTK::AtomIndexTetrad
atoms() : BTK::BuildableMonomerFamilyPattern

- b -

b_factor() : BTK::PDBAtomDecorator< AtomBase >
back() : BTK::SharedVectorBase< T >
base() : BTK::PointerListStrategy< Predicate, Iterator >, BTK::MatchListStrategy< Predicate, Iterator >
begin() : BTK::SharedVectorBase< T >
bond_distance_4() : BTK::BuildableAtomDecorator< AtomBase >
bonds() : BTK::BuildableMonomerFamilyPattern
BOOST_CLASS_REQUIRE2() : BTK::atom_rotator< AtomType >
boot_build() : BTK::BuildableAtomDecorator< AtomBase >
BTKAssertion() : BTK::debug::BTKAssertion
build() : BTK::BuildableAtomDecorator< AtomBase >
build_atom() : BTK::BuildableMonomer< AtomType >, BTK::BuildableAtomGroupConcept
build_strategy() : BTK::Polymer< MonomerType >
BuildableAtomDecorator() : BTK::BuildableAtomDecorator< AtomBase >
BuildableMonomer() : BTK::BuildableMonomer< AtomType >

- c -

CachedUnaryFunction() : BTK::CachedUnaryFunction< T, ArgType >
chain_id() : BTK::Polymer< MonomerType >, BTK::PDBAtomDecorator< AtomBase >, BTK::Molecule< AtomType >
CHARMMAtomDecorator() : BTK::CHARMMAtomDecorator< AtomBase >
chi1() : BTK::PeptideHeavyAtom< AtomType >
chi2() : BTK::PeptideHeavyAtom< AtomType >
chi3() : BTK::PeptideHeavyAtom< AtomType >
chi4() : BTK::PeptideHeavyAtom< AtomType >
clear() : BTK::SharedVectorBase< T >
create_monomers() : BTK::Polymer< MonomerType >

- d -

deep_copy() : BTK::SharedVectorBase< T >
dereference() : BTK::PointerListStrategy< Predicate, Iterator >, BTK::MatchListStrategy< Predicate, Iterator >
dih1234() : BTK::AtomIndexTetrad

- e -

EigenState() : BTK::EigenState
element() : BTK::Atom
element_name() : BTK::Atom
end() : BTK::SharedVectorBase< T >
erase() : BTK::SharedVectorBase< T >
erase_group_variant() : BTK::BuildableMonomer< AtomType >

- f -

family_pattern() : BTK::PeptideHeavyAtomFamilyPattern, BTK::PeptideFamilyPattern, BTK::PeptideBBFamilyPattern, BTK::BuildableMonomerFamilyPattern
front() : BTK::SharedVectorBase< T >

- g -

get_chain() : BTK::StructureFileReader, BTK::PDBReader
get_chain_ids() : BTK::StructureFileReader
get_chain_labels() : BTK::PDBReader
get_header() : BTK::StructureFileReader, BTK::PDBReader
get_next_chain() : BTK::StructureFileReader
group_index() : BTK::Monomer< AtomType >, BTK::Molecule< AtomType >, BTK::BuildableMonomer< AtomType >, BTK::AtomGroupConcept, BTK::AtomContainer< AtomType >, BTK::Atom
group_name1() : BTK::Monomer< AtomType >, BTK::BuildableMonomer< AtomType >
group_name3() : BTK::PDBAtomDecorator< AtomBase >, BTK::Monomer< AtomType >, BTK::BuildableMonomer< AtomType >, BTK::AtomGroupConcept, BTK::AtomContainer< AtomType >, BTK::Atom
group_num() : BTK::PDBAtomDecorator< AtomBase >, BTK::Monomer< AtomType >, BTK::AtomGroupConcept, BTK::AtomContainer< AtomType >, BTK::Atom
group_variant_codes() : BTK::AtomGroupConcept, BTK::AtomContainer< AtomType >
group_variants() : BTK::BuildableMonomer< AtomType >

- i -

insert() : BTK::SharedVectorBase< T >, BTK::SharedVector< T >
insert_code() : BTK::PDBAtomDecorator< AtomBase >
insert_group_variant() : BTK::BuildableMonomer< AtomType >
instance() : BTK::PeptideHeavyAtomFamilyPattern, BTK::PeptideBBFamilyPattern
is_bond_distance_cached() : BTK::BuildableAtomDecorator< AtomBase >
is_built() : BTK::BuildableAtomDecorator< AtomBase >
is_group_num_gt() : BTK::is_group_num_gt
is_group_num_lt() : BTK::is_group_num_lt
is_real_torsion() : BTK::AtomIndexTetrad
is_selected() : BTK::Atom

- l -

len34() : BTK::AtomIndexTetrad

- m -

MatchListStrategy() : BTK::MatchListStrategy< Predicate, Iterator >
Molecule() : BTK::Molecule< AtomType >
Monomer() : BTK::Monomer< AtomType >
monomer() : BTK::MonomerContainer< MonomerType >
monomer_back() : BTK::MonomerContainer< MonomerType >
monomer_begin() : BTK::MonomerContainer< MonomerType >
monomer_end() : BTK::MonomerContainer< MonomerType >
monomer_front() : BTK::MonomerContainer< MonomerType >
monomer_push_back() : BTK::Polymer< MonomerType >
monomer_size() : BTK::MonomerContainer< MonomerType >
MonomerContainer() : BTK::MonomerContainer< MonomerType >

- n -

name() : BTK::Polymer< MonomerType >, BTK::Molecule< AtomType >

- o -

occupancy() : BTK::PDBAtomDecorator< AtomBase >
omega() : BTK::PeptideBB< AtomType >
operator *() : BTK::PredicateIterator< Predicate, Iterator, Strategy >
operator!=() : BTK::PredicateIterator< Predicate, Iterator, Strategy >
operator()() : BTK::CachedUnaryFunction< T, ArgType >, BTK::is_selected, BTK::is_group_num_lt, BTK::is_group_num_gt, BTK::is_protein_bb, BTK::is_calpha, BTK::is_any, BTK::atom_rotator< AtomType >
operator++() : BTK::PredicateIterator< Predicate, Iterator, Strategy >
operator->() : BTK::PredicateIterator< Predicate, Iterator, Strategy >
operator<() : BTK::EigenState, BTK::AtomIndexTetrad, BTK::AtomIndexPair
operator=() : BTK::SharedVectorBase< T >, BTK::SharedVector< T >, BTK::SasaAtomDecorator< AtomBase >, BTK::PredicateIterator< Predicate, Iterator, Strategy >, BTK::PointerListStrategy< Predicate, Iterator >, BTK::MatchListStrategy< Predicate, Iterator >, BTK::Polymer< MonomerType >, BTK::PDBAtomDecorator< AtomBase >, BTK::MonomerContainer< MonomerType >, BTK::Monomer< AtomType >, BTK::Molecule< AtomType >, BTK::BuildableMonomer< AtomType >, BTK::BuildableAtomDecorator< AtomBase >, BTK::AtomContainer< AtomType >
operator==() : BTK::PredicateIterator< Predicate, Iterator, Strategy >, BTK::AtomIndexTetrad
operator[]() : BTK::SharedVectorBase< T >

- p -

PDBAtomDecorator() : BTK::PDBAtomDecorator< AtomBase >
PDBReader() : BTK::PDBReader
PeptideBB() : BTK::PeptideBB< AtomType >
PeptideBBFamilyPattern() : BTK::PeptideBBFamilyPattern
PeptideFamilyPattern() : BTK::PeptideFamilyPattern
PeptideHeavyAtom() : BTK::PeptideHeavyAtom< AtomType >
PeptideHeavyAtomFamilyPattern() : BTK::PeptideHeavyAtomFamilyPattern
phi() : BTK::PeptideBB< AtomType >
PointerListStrategy() : BTK::PointerListStrategy< Predicate, Iterator >
Polymer() : BTK::Polymer< MonomerType >
position() : BTK::Atom
PredicateIterator() : BTK::PredicateIterator< Predicate, Iterator, Strategy >
print_pdb_line() : BTK::Atom
psi() : BTK::PeptideBB< AtomType >
push_back() : BTK::SharedVectorBase< T >

- r -

res_name() : BTK::PDBAtomDecorator< AtomBase >
res_num() : BTK::PDBAtomDecorator< AtomBase >
reserve() : BTK::SharedVectorBase< T >
resize() : BTK::SharedVectorBase< T >

- s -

sasa_radius() : BTK::SasaAtomDecorator< AtomBase >
sasa_solvation_parameter() : BTK::SasaAtomDecorator< AtomBase >
SasaAtomDecorator() : BTK::SasaAtomDecorator< AtomBase >
set_alt_loc() : BTK::PDBAtomDecorator< AtomBase >
set_atom_index() : BTK::Atom
set_atom_name() : BTK::PDBAtomDecorator< AtomBase >
set_atom_num() : BTK::PDBAtomDecorator< AtomBase >
set_b_factor() : BTK::PDBAtomDecorator< AtomBase >
set_bond_distance_4() : BTK::BuildableAtomDecorator< AtomBase >
set_buildable_group() : BTK::BuildableAtomDecorator< AtomBase >
set_chain_id() : BTK::Polymer< MonomerType >, BTK::PDBAtomDecorator< AtomBase >, BTK::Molecule< AtomType >
set_chi1() : BTK::PeptideHeavyAtom< AtomType >
set_chi2() : BTK::PeptideHeavyAtom< AtomType >
set_chi3() : BTK::PeptideHeavyAtom< AtomType >
set_chi4() : BTK::PeptideHeavyAtom< AtomType >
set_element() : BTK::Atom
set_group() : BTK::Atom
set_group_name3() : BTK::PDBAtomDecorator< AtomBase >
set_group_num() : BTK::PDBAtomDecorator< AtomBase >, BTK::Monomer< AtomType >
set_insert_code() : BTK::PDBAtomDecorator< AtomBase >
set_is_bond_distance_cached() : BTK::BuildableAtomDecorator< AtomBase >
set_is_built() : BTK::BuildableAtomDecorator< AtomBase >
set_is_selected() : BTK::Atom
set_name() : BTK::Polymer< MonomerType >, BTK::Molecule< AtomType >
set_occupancy() : BTK::PDBAtomDecorator< AtomBase >
set_omega() : BTK::PeptideBB< AtomType >
set_phi() : BTK::PeptideBB< AtomType >
set_position() : BTK::Atom
set_psi() : BTK::PeptideBB< AtomType >
set_res_name() : BTK::PDBAtomDecorator< AtomBase >
set_res_num() : BTK::PDBAtomDecorator< AtomBase >
set_torsion_angle() : BTK::BuildableMonomer< AtomType >
shallow_copy() : BTK::SharedVectorBase< T >
shallow_insert() : BTK::SharedVectorBase< T >
shallow_push_back() : BTK::SharedVectorBase< T >
SharedVector() : BTK::SharedVector< T >
SharedVectorBase() : BTK::SharedVectorBase< T >
size() : BTK::SharedVectorBase< T >
stream() : BTK::StructureFileReader
StructureFileReader() : BTK::StructureFileReader
StructureFileReadFailure() : BTK::StructureFileReader::StructureFileReadFailure
sync_molecule_to_monomers() : BTK::Polymer< MonomerType >

- t -

tetrad_helper() : BTK::BuildableMonomerFamilyPattern
tetrads() : BTK::BuildableMonomerFamilyPattern
torsion_angle() : BTK::BuildableMonomer< AtomType >
torsion_atoms() : BTK::BuildableMonomerFamilyPattern

- w -

what() : BTK::StructureFileReader::StructureFileReadFailure, BTK::debug::BTKAssertion

- ~ -

~Atom() : BTK::Atom
~AtomContainer() : BTK::AtomContainer< AtomType >
~BTKAssertion() : BTK::debug::BTKAssertion
~BuildableAtomDecorator() : BTK::BuildableAtomDecorator< AtomBase >
~CachedUnaryFunction() : BTK::CachedUnaryFunction< T, ArgType >
~Molecule() : BTK::Molecule< AtomType >
~Monomer() : BTK::Monomer< AtomType >
~MonomerContainer() : BTK::MonomerContainer< MonomerType >
~PDBAtomDecorator() : BTK::PDBAtomDecorator< AtomBase >
~PDBReader() : BTK::PDBReader
~Polymer() : BTK::Polymer< MonomerType >
~SasaAtomDecorator() : BTK::SasaAtomDecorator< AtomBase >
~SharedVector() : BTK::SharedVector< T >
~SharedVectorBase() : BTK::SharedVectorBase< T >
~StructureFileReader() : BTK::StructureFileReader

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